Insertion junction: CLIP2.062744_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062744
Chromosome:chromosome 3
Location:2552847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGAACATTTGAGAGTAAAGTCACGCGGGCAGGCCAGCAGTCGCGTG
Internal bar code:TGGTGGATACAATTTGACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:5450
LEAP-Seq percent confirming:99.2188
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGAAGAAGGGAGGGCTG
Suggested primer 2:GCAGGCTGCTGATGTATTGC