Insertion junction: CLIP2.062755_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062755
Chromosome:chromosome 11
Location:384500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGACCTGAGCTTAGGCTTGCTGGCAGGTCAGCGCCATACCTGCAGCG
Internal bar code:CTGTCTATTCGAAAATTGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAGACTGGGAAGCTTGT
Suggested primer 2:CTCGAGGGAGGGGTTACTGA