Insertion junction: CLIP2.062767_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062767
Chromosome:chromosome 3
Location:6354486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192400 (1 of 1) IPR013769 - Band 3 cytoplasmic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCCGCTGCGCACCGCTCTTCGCGCTGCTGCTGGCTGCCATATCAACA
Internal bar code:TGGGAACATAGTCCATCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2433
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCGAAAGGTAGAGGCGG
Suggested primer 2:GGCCTAAAATAAGCCGCAGC