Insertion junction: CLIP2.062768_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062768
Chromosome:chromosome 1
Location:1402873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007400 5'UTR/5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCTGCCGATAACCTCTGGCGCGCTCCCGCGCCCTGCGCACGCTAA
Internal bar code:CTGATTAAGTCCTGGGGATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAGTAACCACCAGCCT
Suggested primer 2:GAACAGCGCAGAACCCTAGT