Insertion junction: CLIP2.062774_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062774
Chromosome:chromosome 9
Location:6114222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413000 (1 of 100) IPR001810 - F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCTTGCACGTATTTCGAATCCGGCTGTGCAAGGCCGTTCGGGGTTCT
Internal bar code:TAAGGCCGTGCTCTCGTGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACTTGCCCCATCATCA
Suggested primer 2:ACACGCATTCTAGTGCCACA