Insertion junction: CLIP2.062775_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062775
Chromosome:chromosome 5
Location:2972057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCATCCAATCCAGAAGTGGCGTGCCCGTCCTTCACATGCACACGAC
Internal bar code:TACCTAAGGCGCAAATTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACAAAACCCCCGACAAC
Suggested primer 2:CGTGATCGTTGCAAGCTACG