Insertion junction: CLIP2.062777_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062777
Chromosome:chromosome 2
Location:5236643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112333 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCACGCACAAACCCTTAGGTCGTCGTCGAGCGAAGGACGTGCAAGGG
Internal bar code:TGGTAAATGGTCGGTGAGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGTATCTAGTGCCGTC
Suggested primer 2:GGTGCAGGTTGGCTCTTTTG