Insertion junction: CLIP2.062777_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062777
Chromosome:chromosome 2
Location:5236644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112333 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCCGCGCTCAAGCTTGCTGCGATCGCGCTGATATAAGCTGTATTCCC
Internal bar code:GCAGGCTCACGGGCGAAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2579
LEAP-Seq percent confirming:94.9153
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAGGTTGGCTCTTTTG
Suggested primer 2:GGCCTGTATCTAGTGCCGTC