Insertion junction: CLIP2.062778_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062778
Chromosome:chromosome 3
Location:6489025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193700 (1 of 1) PTHR10992//PTHR10992:SF749 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTACTTATGCCCTGTGCGTCTATTGGGTTTCTACAATTTAGAGGGAG
Internal bar code:AGTCCCTGAGGGGCGGCCAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:5833
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAATTGAGCATAGCAGGC
Suggested primer 2:CGATTGGTGAATGCTGCTCG