Insertion junction: CLIP2.062780_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062780
Chromosome:chromosome 4
Location:3955736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231418 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACACACCATCCCATGGATGGCTACCCCCCTCCGGCTTTCGCCGGGTGC
Internal bar code:GATTAATCTCCATCTTTCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4793
LEAP-Seq percent confirming:81.4286
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCGAGGTGTTAAGTGT
Suggested primer 2:TTTTGGATGTCGCCTCGTCA