Insertion junction: CLIP2.062803_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062803
Chromosome:chromosome 17
Location:3310749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722450 (1 of 18) PF12937 - F-box-like (F-box-like) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCATGGTAGCCGGTAGATGCGCTCCTAGTAGGGCGCTCTGCTGACAG
Internal bar code:AGTACAGAGTTTTGGTTGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5276
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCCTCGTGTCGATACAG
Suggested primer 2:TTCAACACTGCTGCACATGC