Insertion junction: CLIP2.062805_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062805
Chromosome:chromosome 2
Location:6876367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388652 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain 3'UTR
Cre09.g388689 (1 of 1) IPR000719//IPR002290//IPR011009//IPR013785//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Aldolase-type TIM barrel // Tyrosine-protein kinase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGTCACTGTGTACGTGCTAACTTGCGCATTTACGCCGTATTCACTTA
Internal bar code:CTCGACAAAATGGAAGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATTGCCGTTATGAGCG
Suggested primer 2:TCGATCGGGGTTTGAAAGGG