Insertion junction: CLIP2.062808_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062808
Chromosome:chromosome 10
Location:2750223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438150 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCTAGGACAGCGAACAAAGGCAAACTGGGGGCCGCGAGGGTCTGCG
Internal bar code:GCGTGCTCCGAACCTCAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2448
LEAP-Seq percent confirming:89.1304
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGAGTCCTTCCTTGCA
Suggested primer 2:CATGCCGCAAATACGCATGA