Insertion junction: CLIP2.062809_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062809
Chromosome:chromosome 14
Location:640410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612100 RWP3 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR
Cre14.g612150 MOT18,PAP10 Class-II RNA nucleotidyl transferase 10; (1 of 1) K14079 - poly(A) RNA polymerase GLD2 [EC:2.7.7.19] (PAPD4, GLD2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGAATGGCTATCAATGGTTCAGTGCCCCAGCCCAAGCATGGGCCGG
Internal bar code:AGGGCATAGAGAATTAAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3700
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTTTGTTCTCCGGCC
Suggested primer 2:GGCTACGCACGGATATGTGA