Insertion junction: CLIP2.062810_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062810
Chromosome:chromosome 2
Location:7951319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145300 (1 of 1) K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72) gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGAGAAGATGAAAAGGCCGCGGACATGTACAAGATCTGGGACTCTG
Internal bar code:ATATGTACCGGTACTATGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAACAAACCCCGAAGTGC
Suggested primer 2:GATGGGTGACAGGGTGAGTG