Insertion junction: CLIP2.062812_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062812
Chromosome:chromosome 12
Location:8948978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545500 (1 of 140) IPR002048 - EF-hand domain 3'UTR
Cre12.g545550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAATTACATGCAAAAGGGCACATGGCAGCAATCCAAGCAAATCCATC
Internal bar code:AACCGTTGGGAGCTGGTCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACAGAACATGCAAGCGC
Suggested primer 2:GCGGATGTACCCTGTGTCAA