Insertion junction: CLIP2.062813_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062813
Chromosome:chromosome 16
Location:4484443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCAGTTGATGAACGCGGCTGAGCTGTGCCCTCTGTCCAGGATGGGT
Internal bar code:AGACGGTCATCGGGCCACACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATACACCTCGGGCTCATCC
Suggested primer 2:GTGCCCAGTTGAACAAGCTG