Insertion junction: CLIP2.062814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062814
Chromosome:chromosome 12
Location:3381795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498050 CPS3 Putative subunit of mRNA cleavage and polyadenylation specificity factor; (1 of 1) K14403 - cleavage and polyadenylation specificity factor subunit 3 (CPSF3, YSH1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTCGATTGTCAAGCGAGCGTTCAGGTGGGATAGAATGCGCTTGGTT
Internal bar code:GGTGCCTTTGCATCGCTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3750
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAATGGATTTCCTGGGG
Suggested primer 2:CCTGCAATCTGGGGTCACTT