Insertion junction: CLIP2.062816_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062816
Chromosome:chromosome 17
Location:2612419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716500 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCACCCACTCGCTGCAAAGCCTCTCACTTAACTAACCTACTATGCAT
Internal bar code:ACGTCGTCGGCCCCAGTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:6.89655
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCAGACGTACAACTCAA
Suggested primer 2:AAGAAGCATCCCGGACAAGG