Insertion junction: CLIP2.062819_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062819
Chromosome:chromosome 4
Location:34924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213985 (1 of 62) PF00226 - DnaJ domain (DnaJ) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTTTACAGTGCCCTCCACGGGTGCGACATGCCCCCACGGTATTCGG
Internal bar code:GAGTGTTCGACCGTCGTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1880
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGTCAGTGGCAAGGTC
Suggested primer 2:GTGTGTCTTGCCGCTCTAGT