Insertion junction: CLIP2.062820_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062820
Chromosome:chromosome 14
Location:595300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611800 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGACGCCAAATCCGAACCATGCTATGCGAGTTAAGTACTATGTCCGTG
Internal bar code:GTAGGGAAGGTCGTACGTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2566
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCAACACGTAGGGCTT
Suggested primer 2:GGATAGTCCGTGCAGATGGG