Insertion junction: CLIP2.062822_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062822
Chromosome:chromosome 16
Location:243141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694500 CGL57,DNJ37 (1 of 1) PTHR24078//PTHR24078:SF190 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGATATGGTACATCGGGAGCCGCTGTCTGACCCATACGAAAGCAGG
Internal bar code:GAAACATGGGTATAGAGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACAGCTACAGCCTGAG
Suggested primer 2:TATCAACGCTCATCTCCGCC