Insertion junction: CLIP2.062829_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062829
Chromosome:chromosome 6
Location:8479486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308900 SAM50,TOB55 Sorting assembly machinery 50 kDa subunit; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTACAGGCAAGCACGCCTGTGATTGTGCACGTCCCCACATGCACTTCC
Internal bar code:ATTGTGAATCCTAGAATGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGAGCGGAGTGGTTG
Suggested primer 2:ATGAGACAGATACTGCCGCG