Insertion junction: CLIP2.062835_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062835
Chromosome:chromosome 5
Location:1333059
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATTGCACACAGCCTGCCTTCATCACCAGGACCCAATGAGTAGACGCC
Internal bar code:ATTTAGCTTATTACCTAAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3557
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATCACCACCCACCTTCC
Suggested primer 2:CGACCCAACACAAACACGTC