Insertion junction: CLIP2.062835_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062835
Chromosome:chromosome 14
Location:283072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g609450 PWR4 (1 of 1) IPR000104//IPR006502 - Antifreeze protein, type I // Protein of unknown function PDDEXK-like; PWR motif protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGGTCGTGCGGTCACATTTCAGGAATCACAAGTGTTACAGAGCTTA
Internal bar code:AAATTTCCATACTAGCCTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1577
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGTAGCTTGTCCGCAC
Suggested primer 2:GCCCGCAACATTTTGGAGTT