Insertion junction: CLIP2.062839_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062839
Chromosome:chromosome 9
Location:4853917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402849 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATAGGAGCCCTGTGTGGTGGTAGCTGTGGTGGTAGCTGTGGTGGTGG
Internal bar code:ATGGGCCAACGGGGAGGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCCCTCAGGGAATGGG
Suggested primer 2:ATGTGATTGGGAGTGAGGCG