Insertion junction: CLIP2.062843_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062843
Chromosome:chromosome 10
Location:3300216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443050 PFH3,PHX15,P4H3 Prolyl 4-hydroxylase 3; (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCGAACCCCACAAAATGAAGACAAGTTTCTTTGTCGTCGCGGCTGTT
Internal bar code:TCCGATATTCAAAGTACGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGCGCTCCTCTACACC
Suggested primer 2:ACTCTCTGAACACACCGCTG