Insertion junction: CLIP2.062855_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062855
Chromosome:chromosome 17
Location:2093677
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g711457 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGAGGGAGGGAGGACACCGGTACGCAGGAGGGGAGGGAGTTGGAAGG
Internal bar code:GTTATGTCTCTTGCAAGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTACAACACACTGGGT
Suggested primer 2:TTGTGAGTGCAACAGGAGCA