Insertion junction: CLIP2.062865_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062865
Chromosome:chromosome 7
Location:5747583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGCGTCCCTCTGCACTTTGTCCAACGGATTCTTGGCAAGTCCCGAG
Internal bar code:GTGATAGTTTATGATCTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGAGCTTGCGCAAGTC
Suggested primer 2:ACGGGTCCCATCGAAGTCTA