Insertion junction: CLIP2.062875_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062875
Chromosome:chromosome 16
Location:7339486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679221 ANK27 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGGTGTTCCGTCGTGCCTGCGTGGCGTGCCTGTCAAGCCCTAATTA
Internal bar code:GATACGAGTCAAGCAGTATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:5771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGACCCTATACACACG
Suggested primer 2:CTTGCCACACCACTAGAGGG