Insertion junction: CLIP2.062881_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062881
Chromosome:chromosome 2
Location:8074716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144500 (1 of 5) PTHR10288 - KH DOMAIN CONTAINING RNA BINDING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTAGCCAAGAAAGACGCGGGTGTTGTGTATCCACCAACTGTATCAAC
Internal bar code:TGCATGCTCGGCGTCGTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTTAACCCCACCCCTA
Suggested primer 2:GGCGCTGTTGTGTAACGTTT