Insertion junction: CLIP2.062883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062883
Chromosome:chromosome 16
Location:6230344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676500 (1 of 1) PTHR17630//PTHR17630:SF54 - DIENELACTONE HYDROLASE // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN outside_mRNA
lncRNA_TCONS_00152018 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCGGACTATTGGCCTGCAACCCTTGGACGTCATGTTGTTGATGAAG
Internal bar code:GGGTCTTTGGTATGGGAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4137
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATGGCATGTGATGAAT
Suggested primer 2:GTCTGCCCTGTTTGAGGAGG