Insertion junction: CLIP2.062887_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062887
Chromosome:chromosome 13
Location:1516950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572732 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAAACAAACCTTCACAGCTACACCGCTTTTCAGCAGGACTGCGTCCG
Internal bar code:GATAACAACGTCTGTGCTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTACACGTGCTGTACCTG
Suggested primer 2:TTGACCTTCCTCTGCGTGAC