Insertion junction: CLIP2.062891_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062891
Chromosome:chromosome 7
Location:3467191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGATGTGGACAGACCGAAATGGCGTGTTCAGATGTGGAGGCCCAGCT
Internal bar code:AATATTATTGAGTATGTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTGGCTTTTGACTGGC
Suggested primer 2:AAGTGATTTCGGGGCAGGAG