Insertion junction: CLIP2.062892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062892
Chromosome:chromosome 3
Location:6564864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194500 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAGTGGTTGAGGAGCGAGCGTGGGGCGTGACTGGCTCTGCAAGCGGT
Internal bar code:GAATAGTGTTCCTAAGTAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3893
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGATTTAGGCCCTGGG
Suggested primer 2:GAGTGGGACATGATGCAGCT