Insertion junction: CLIP2.062893_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062893
Chromosome:chromosome 12
Location:3233912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGTGTAAGCTTTGACGACGGCGTGCTAGAACTTGGAGTTGGAATGAA
Internal bar code:CAGGACACTTACGAGCTATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACACAGACTCCGTGAG
Suggested primer 2:TCTTACTTGCGCACGTCCTT