Insertion junction: CLIP2.062901_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062901
Chromosome:chromosome 3
Location:6424685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192950 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCATCTTCCTGTCACAAATTACAGGCATTTTGCTGGACCAGCTGTTCT
Internal bar code:TTTATGATACTTAATTTTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2626
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TACATCTCCGGCGCTGATTC
Suggested primer 2:CAAAGTCTCGCCCCAGACAT