Insertion junction: CLIP2.062905_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062905
Chromosome:chromosome 16
Location:1514468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCGAGGTCAAGGAATGTCAAGGGACTTTAACGAGGTCCGGCCCCCT
Internal bar code:GGACTCAATACGGCCTAATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5006
LEAP-Seq percent confirming:99.0196
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAGCTTATGCATTCCCC
Suggested primer 2:GCGCTTCTGCTTGTGTGAAA