Insertion junction: CLIP2.062912_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062912
Chromosome:chromosome 3
Location:6797590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197100 LRL1 Lipid remodeling regulator 1; (1 of 2) PTHR10641:SF585 - MYB DNA-BINDING-LIKE PROTEIN 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGCTTAAATGCCACAGCAGAAGTACTGTCTACGACCTATTATTGAC
Internal bar code:AGATGCAAAGCATGAGTAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTACCTAGGAACGCGCTG
Suggested primer 2:ACCTTCTTGATGTCTGGCCG