Insertion junction: CLIP2.062914_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062914
Chromosome:chromosome 3
Location:1627858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152650 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGAGTGCAAAGCGGCAAACGCCCCCCATTGAGGCTGCTGCTGTGTG
Internal bar code:GACCATCTCCTAGGGCGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCATTTTGCCGTTACGTG
Suggested primer 2:CAGGCGCAAGTTATGTCTGC