Insertion junction: CLIP2.062914_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062914
Chromosome:chromosome 3
Location:1627890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152650 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAGTACTGAGCCAGCCGGTTCTGCGCCCACACAACTTCCATGCAATGC
Internal bar code:AAGCGCTTACGTTGTCAGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4983
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGCAAGTTATGTCTGC
Suggested primer 2:TGCCATTTTGCCGTTACGTG