Insertion junction: CLIP2.062916_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062916
Chromosome:chromosome 8
Location:1141490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCAAACCAGGCGGGGCAAAACGTAGGCAAGTCCTTGGAGGCGACCCT
Internal bar code:AGGTGAGTTATAGCGGAGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2414
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTGTGCATGTGAGCCA
Suggested primer 2:TTCGGGATCATGGAGAGGGT