Insertion junction: CLIP2.062916_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062916
Chromosome:chromosome 8
Location:1141494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGCGCACGTCATCCGTGACTCTTCAATACCTTGCGCACGCCCCCAA
Internal bar code:TTTGTTCAAACCATTTACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGGATCATGGAGAGGGT
Suggested primer 2:CGTTTTGTGCATGTGAGCCA