Insertion junction: CLIP2.062923_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062923
Chromosome:chromosome 17
Location:2223604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712900 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCGCGCGTTGCCTTGCCAGGCAACGACCTGCACCGAGCCCCACACC
Internal bar code:TCAGCGGCGCTAATGGGTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3692
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGTCGTAGATGATGCG
Suggested primer 2:CGTTACCCTGTGCACCTCAT