Insertion junction: CLIP2.062925_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062925
Chromosome:chromosome 12
Location:2932824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502400 (1 of 1) PTHR23423:SF17 - PROTEIN F40E10.6 3'UTR
Cre12.g502450 ELG8 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGTTGCAGGTCACTGTCCCTGAGGGCCTGTCAGGGGCCCGTGACGG
Internal bar code:AGTGCATCCGGTTGATGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2683
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGTCGGATGCGGAGTAC
Suggested primer 2:GGGGAGCCATATGTACGGTG