Insertion junction: CLIP2.062938_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062938
Chromosome:chromosome 6
Location:2941995
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g273350 NAT17 N-acetyltransferase; (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTCATGGTCACCGCGCAAACGGATTATGCATCACTAGCGAGCATCTT
Internal bar code:ATGAAACAGCACTGGTGTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTCTAATCCTGGTCGC
Suggested primer 2:AAACATGTGAACGCCCAAGC