Insertion junction: CLIP2.062938_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062938
Chromosome:chromosome 6
Location:2941996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273350 NAT17 N-acetyltransferase; (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGAATGGCCGATGGCATGCACCGTAGTCCACCGTCTGACTGCGTCTG
Internal bar code:TTTGTAGCATGATCAGTAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3209
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATGTGAACGCCCAAGC
Suggested primer 2:GCTCCTCTAATCCTGGTCGC