Insertion junction: CLIP2.062944_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062944
Chromosome:chromosome 8
Location:1564830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365400 PRPL31 Chloroplast ribosomal protein L31; (1 of 1) K02909 - large subunit ribosomal protein L31 (RP-L31, rpmE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTTGTTAGAAGCGCGCGTGGAGCAGGAGTCTTACGGGGCAGCGCAC
Internal bar code:AAACTCGGAGACATTTTTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCCTCACTTGAATCCCC
Suggested primer 2:CAACGGTGTGGAGGTCATGA