Insertion junction: CLIP2.062945_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062945
Chromosome:chromosome 8
Location:4145972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACCAGCCCTTCAGTCCATACCCAAACAGCCTGAAAATGCTGCCCGA
Internal bar code:AACTTGGGTCTCAGCTTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTGGATTCAGCCGGGAG
Suggested primer 2:TTACACCCCATCCACCATGC