Insertion junction: CLIP2.062950_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062950
Chromosome:chromosome 16
Location:4875334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687050 (1 of 8) 2.4.1.5 - Dextransucrase / Sucrose 6-glucosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTATTGTTGGAGGGACCGAAGTACGTAGCAAGATGTGTACGGCGGTAC
Internal bar code:TGGTCGAGCAACGCAAGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTACGTGTGTGTGC
Suggested primer 2:GGGCTCACAGTCATTGGGAA